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Combine TreeSummarizedExperiment objects6 years ago
Combine multiple TreeSummarizedExperiment objects | Subset a TSE object | Change specific trees of TSE | Session Info | Reference
Introduction to TreeSummarizedExperiment6 years ago
Introduction | TreeSummarizedExperiment | Anatomy of TreeSummarizedExperiment | Toy data | The construction of TreeSummarizedExperiment | The accessor functions | Assays, rowData, colData, and metadata | rowTree, colTree, rowLinks, colLinks | Reference sequence data | The subseting function | Changing the tree | Aggregation | The column dimension | The row dimension | Both dimensions | Functions operating on the phylo object. | Conversion of the node label and the node number | Find the descendants | More functions | Custom functions for the TreeSummarizedExperiment class | Session Info | Reference