Introduction to TreeSummarizedExperiment6 years ago
Introduction | TreeSummarizedExperiment | Anatomy of TreeSummarizedExperiment | Toy data | The construction of TreeSummarizedExperiment | The accessor functions | Assays, rowData, colData, and metadata | rowTree, colTree, rowLinks, colLinks | Reference sequence data | The subseting function | Changing the tree | Aggregation | The column dimension | The row dimension | Both dimensions | Functions operating on the phylo object. | Conversion of the node label and the node number | Find the descendants | More functions | Custom functions for the TreeSummarizedExperiment class | Session Info | Reference
TreeSummarizedExperiment 2.21.0Ruizhu HUANG, Charlotte Soneson, Mark RobinsonIntroduction_to_treeSummarizedExperiment.Rmd